BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E09SP1|AL425553
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1898 0.0
>3x_Contig1604
Length = 15703
Score = 1898 bits (948), Expect = 0.0
Identities = 982/1002 (98%), Gaps = 1/1002 (0%)
Strand = Plus / Minus
Query: 1 ctttcattagaatctattttaatttttagatcctcgtattcgtcgtcattgtgtatcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1531 ctttcattagaatctattttaatttttagatcctcgtattcgtcgtcattgtgtatcaat 1472
Query: 61 tcattagtatctgacacatagtcaatggcatcatcttcctccaacttcaccctcttggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1471 tcattagtatctgacacatagtcaatggcatcatcttcctccaacttcaccctcttggtt 1412
Query: 121 gtkttcctttgccttcgcctgggagtggcagtatctgtcgatgagtgcttcctactctct 180
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1411 gttttcctttgccttcgcctgggagttgcagtatctgtcgatgagtgcttcctactctct 1352
Query: 181 tcatctttatattcagtctcaatgctaacagactctaatgtgagcgatcgtktgggtgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1351 tcatctttatattcagtctcaatgctaacagactctaatgtgagcgatcgtttgggtgac 1292
Query: 241 ttaggtcgtaccgttttggaaggcgaaagaraatcaaaacttttaagtttcttcggtgac 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1291 ttaggtcgtaccgttttggaaggcgaaagaaaatcaaaacttttaagtttcttcggtgac 1232
Query: 301 tgakatcttactttggaaggkgatatgaaaatgtcttggtgatttacaatatcaatgtct 360
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 tgatatcttactttggaaggtgatatgaaaatgtcttggtgatttacaatatcaatgtct 1172
Query: 361 tcttcttcttcctcattatcactgcactctttcttcgtcatgttttcaaggtttaaccgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 tcttcttcttcctcattatcactgcactctttcttcgtcatgttttcaaggtttaaccgc 1112
Query: 421 tccaagataatcaaatactctaaagtctagagaatggaaackaacttataaatgtgggag 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1111 tccaagataatcaaatactctaaagtctagagaatggaaactaacttataaatgtgggag 1052
Query: 481 tggttcttctatcaaacctcgcccacaggtattaaccctatacactatatktgacataca 540
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1051 ttgttcttctatcaaacctcgcccacaggtattaaccctatacactatatttgacataca 992
Query: 541 aaccttaaatgtcaacataaatatcgattcaragttaaaggcatgaagctctactttttt 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 991 aaccttaaatgtcaacataaatatcgattcaaagttaaaggcatgaagctctactttttt 932
Query: 601 ktttctgaaaaakktctatatgagaggaggaaagarttaaracctactctcaataatkat 660
||||||||||| ||||||||||| ||||||||| |||| |||||||||||||||| ||
Sbjct: 931 ttttctgaaaaatttctatatgagatgaggaaagaattaaaacctactctcaataattat 872
Query: 661 agcgcatgaggttcattttagagtgtatgcgataacgtgttgaaggagcttatgggcagg 720
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 agcg-atgaggttcattttagagtgtatgcgataacgtgttgaaggagcttatgggcagg 813
Query: 721 taacggtgcgttaacgtatcgtgtttgaggagtctgacattgagaattaagttgtaggat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 taacggtgcgttaacgtatcgtgtttgaggagtctgacattgagaattaagttgtaggat 753
Query: 781 gctttcgttttgcccattatgcaataacatgttgttggtatcaaaagctgattcaggtct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gctttcgttttgcccattatgcaataacatgttgttggtatcaaaagctgattcaggtct 693
Query: 841 gtataaactagcatgcggatcatgcccataccagtttttaattgatgggatagaggtata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gtataaactagcatgcggatcatgcccataccagtttttaattgatgggatagaggtata 633
Query: 901 cgatagaaagaacctccctaggaaagaagttgatgatgtcttaggtggagaaggtgcatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cgatagaaagaacctccctaggaaagaagttgatgatgtcttaggtggagaaggtgcatg 573
Query: 961 ggataatgttgaacagacagcagcacaatgtccgaaccawga 1002
|||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 572 ggataatgttgaccagacagcagcacaatgtccgaaccatga 531
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7341
Number of Sequences: 1807
Number of extensions: 7341
Number of successful extensions: 89
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)